GSM1961186: Total RNA pol II ChIP-seq M12 WT R2; Mus musculus; ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
RNA polymerase
Antigen
RNA polymerase II
Cell type
Cell type Class
Blood
Cell type
M12
NA
NA
Attributes by original data submitter
Sample
source_name
M12 B Lymphomas
cell line
B Lymphoma cell line M12
genotype/variation
WT
chip target
RNA pol II
chip antibody
rabbit anti pan CTD (Schroeder eta l Genes Dev. 14:2435, 2000)
Sequenced DNA Library
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
cross-linked Chromatin was sonicated with a Bioruptor IPs from 1-2 mg of cross-linked extract were immunoprecipitated, and prepared for illumina library construction by repair with Klenow, T4 DNA polymerase and T4 polynucleotide kinase, A-tailing with Klenow exo-, ligation to branched adaptors, gel purification of ~200bp fragments, and amplification (18cycles) with Illumina Tru-seq primers using Phusion DNA polymerase. ChIP-seq 1X 50 base reads