SRX145998
GSM892257: Znf335b ChIPSeq; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Zfp335

Cell type

Cell type Class
Embryo
Cell type
Embryonic brains
NA
NA

Attributes by original data submitter

Sample

source_name
lateral telencephalon
developmental stage
E14.5
strain
C57BL/6
antibody
NIF1
antibody vendor
Bethyl

Sequenced DNA Library

library_name
GSM892257: Znf335b_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
23444810
Reads aligned (%)
59.8
Duplicates removed (%)
10.8
Number of peaks
838 (qval < 1E-05)

mm9

Number of total reads
23444810
Reads aligned (%)
59.7
Duplicates removed (%)
10.9
Number of peaks
870 (qval < 1E-05)

Base call quality data from DBCLS SRA