Antigen

Antigen Class

Histone

Antigen

H3K27ac

Cell type

Cell type Class

Digestive tract

Cell type

SNU-638

Primary Tissue

Stomach

Site of Extraction

Ascites

Tissue Diagnosis

Carcinoma

Sample

source_name

SNU638-H3K27ac

cell line

SNU638

chip antibody

H3K27ac

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

A protocol generated at Myer`s laboratory (http://hudsonalpha.org/myers-lab/protocols) libraries were prepared for sequencing using standard Illumina protocols

Sequencing Platform

instrument_model

Illumina HiSeq 2000

hg38

Number of total reads

26593307

Reads aligned (%)

7.7

Duplicates removed (%)

0.9

Number of peaks

725 (qval < 1E-05)

hg19

Number of total reads

26593307

Reads aligned (%)

7.7

Duplicates removed (%)

1.4

Number of peaks

728 (qval < 1E-05)