SRX145799
GSM926625: Stat3 (Dex+LIF); Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Stat1

Cell type

Cell type Class
Neural
Cell type
Corticotrophs
MeSH Description
Anterior pituitary cells that produce ADRENOCORTICOTROPHIC HORMONE.

Attributes by original data submitter

Sample

source_name
AtT-20 corticotroph cells treated with Stat3 (Dex+LIF)
cell line
AtT-20
cell type
pituitary corticotroph cell
treatment
Dex+LIF
chip antibody
p-STAT3 (sc-7993) and STAT3 (sc-482x) from SantaCruz

Sequenced DNA Library

library_name
GSM926625: Stat3 (Dex+LIF)
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
48482236
Reads aligned (%)
95.8
Duplicates removed (%)
27.1
Number of peaks
2876 (qval < 1E-05)

mm9

Number of total reads
48482236
Reads aligned (%)
95.6
Duplicates removed (%)
27.1
Number of peaks
3045 (qval < 1E-05)

Base call quality data from DBCLS SRA