Curated Sample Data


Genome
mm9
Antigen Class
DNase-seq
Antigen
DNase-Seq
Cell type Class
Blood
Cell type
Pro-B cells

Cell type information


NA
NA

Attributes by Original Data Submitter


source_name
pre-B lymphocyte
transfection
control
time
12h
treatment
4-OHT
dose
0.5 uM
cell line
B3
cell type
pre-B lymphocyte

Metadata from Sequence Read Archive

Library Description


library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Platform Information


instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

External Database Query

Logs in read processing pipeline


Number of total reads
49390393
Reads aligned (%)
86.9
Duplicates removed (%)
7.4
Number of peaks
10397 (qval < 1E-05)

Sequence Quality Data from DBCLS SRA