SRX144716
GSM922788: H3K79me2 ChIPSeq; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K79me2

Cell type

Cell type Class
Uterus
Cell type
HeLa
Primary Tissue
Cervix
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

source_name
cervical cancer cell line
cell line
HeLa S3
chip antibody
H3K79me2
chip vendor
Abcam
chip lot
803369

Sequenced DNA Library

library_name
GSM922788: H3K79me2_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
13571131
Reads aligned (%)
90.5
Duplicates removed (%)
16.7
Number of peaks
6486 (qval < 1E-05)

hg19

Number of total reads
13571131
Reads aligned (%)
90.4
Duplicates removed (%)
16.8
Number of peaks
6523 (qval < 1E-05)

Base call quality data from DBCLS SRA