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For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For dm6
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For dm3
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: E(bx)
wikigenes
PDBj
CellType: Kc167
ATCC
MeSH
RIKEN BRC
SRX14430631
GSM5945703: Kc167 nurfkd NURF R3; Drosophila melanogaster; ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
TFs and others
Antigen
E(bx)
Cell type
Cell type Class
Cell line
Cell type
Kc167
Source
e/se
Developmental Stage
dorsal closure stage
Attributes by original data submitter
Sample
source_name
Kc167
cell line
Kc167 cells
developmental stage
embryo
Sex
female
treatment
nurf301kd
chip antibody
NURF
Sequenced DNA Library
library_name
GSM5945703
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
ChIP-seq was performed as described previously (Bag et al., 2019). ChIP-seq library was performed as described previously (Bag et al., 2019, Matzat et al., 2012).
Sequencing Platform
instrument_model
Illumina HiSeq 4000
Where can I get the processing logs?
Read processing pipeline
log
dm6
Number of total reads
5531913
Reads aligned (%)
72.5
Duplicates removed (%)
44.1
Number of peaks
2253 (qval < 1E-05)
dm3
Number of total reads
5531913
Reads aligned (%)
72.9
Duplicates removed (%)
41.6
Number of peaks
1806 (qval < 1E-05)
Base call quality data from
DBCLS SRA