SRX144167
GSM921131: H3K27ac MB replicate2; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27ac

Cell type

Cell type Class
Muscle
Cell type
C2C12
Primary Tissue
Skeletal Muscle
Tissue Diagnosis
NOS

Attributes by original data submitter

Sample

source_name
Growing C1C12 myoblasts
cell type
C2C12
chromatin preparation method
MNAse digestion
chip antibody
H3K27Ac, Abcam: Ab4729

Sequenced DNA Library

library_name
GSM921131: H3K27ac_MB_replicate2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
44738076
Reads aligned (%)
85.5
Duplicates removed (%)
13.1
Number of peaks
29598 (qval < 1E-05)

mm9

Number of total reads
44738076
Reads aligned (%)
85.4
Duplicates removed (%)
13.1
Number of peaks
29641 (qval < 1E-05)

Base call quality data from DBCLS SRA