Antigen

Antigen Class

Histone

Antigen

H3K79me3

Cell type

Cell type Class

Muscle

Cell type

C2C12

Primary Tissue

Skeletal Muscle

Tissue Diagnosis

NOS

Sample

source_name

C2C12

biomaterial_provider

Barbara Wold lab

lab

Caltech-m

lab description

Wold - Califonia Institute of Technology

datatype

ChipSeq

datatype description

Chromatin IP Sequencing

cell

C2C12

cell organism

mouse

cell description

Myoblast cell line derived from thigh muscle of C3H mice after crush injury

cell sex

F

antibody

H3K79me3_(ab2621)

antibody antibodydescription

Rabbit polyclonal. Antibody Target: H3K79me3

antibody targetdescription

Associated with the gene body of actively transcribed genes

antibody vendorname

Abcam

antibody vendorid

ab2621

control

Control_50bp

control description

This data represents a control being compared to experiments using read length of 50 bp

treatment

None

treatment description

No special treatment or protocol applies

age

immortalized

age description

Immortal cells

control

Control_50bp

control description

This data represents a control being compared to experiments using read length of 50 bp

controlid

11612

labexpid

11907

labversion

Myoblast

replicate

1

strain

C3H

strain description

Strain C3H, Very related to C57BL/6

Sequenced DNA Library

library_name

GSM918410: Caltech_ChipSeq_C2C12_H3K79me3_(ab2621)_Control_50bp

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

mm10

Number of total reads

18304526

Reads aligned (%)

96.9

Duplicates removed (%)

11.0

Number of peaks

1581 (qval < 1E-05)

mm9

Number of total reads

18304526

Reads aligned (%)

96.7

Duplicates removed (%)

11.1

Number of peaks

1619 (qval < 1E-05)