Antigen

Antigen Class

TFs and others

Antigen

Nr3c1

Cell type

Cell type Class

Liver

Cell type

Liver

MeSH Description

A large lobed glandular organ in the abdomen of vertebrates that is responsible for detoxification, metabolism, synthesis and storage of various substances.

Sample

source_name

liver

strain

C57BL/6

chip antibody

cocktail of GR Abs (3.3ul of each Ab): PA1-511A (ThermoScientific), MA1-510 (ThermoScientific), M-20 (sc-1004, Santa Cruz)

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

crosslinked material was lyzed and sonicated. Chromatin precipitated with antibody and DNA was purified by ethanol precipitation

Sequencing Platform

instrument_model

Illumina HiSeq 2000

mm10

Number of total reads

26965707

Reads aligned (%)

100.0

Duplicates removed (%)

15.7

Number of peaks

138 (qval < 1E-05)

mm9

Number of total reads

26965707

Reads aligned (%)

97.8

Duplicates removed (%)

11.2

Number of peaks

475 (qval < 1E-05)