Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CDK9

Cell type

Cell type Class
Blood
Cell type
OCI-AML3
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Myelogenous

Attributes by original data submitter

Sample

source_name
Derivative of cell line OCI-AML3
cell line
OCIAML-3-NPM1c-FKBP12
antibody
CDK9
antibody manufacturer
Santa Cruz
antibody catalog number
13130
agent
DMSO
timepoint
24 hours

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
29427043
Reads aligned (%)
96.4
Duplicates removed (%)
38.4
Number of peaks
601 (qval < 1E-05)

hg19

Number of total reads
29427043
Reads aligned (%)
95.7
Duplicates removed (%)
39.0
Number of peaks
579 (qval < 1E-05)

Base call quality data from DBCLS SRA