Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K36me3

Cell type

Cell type Class
Gonad
Cell type
Oocytes
MeSH Description
Female germ cells derived from OOGONIA and termed OOCYTES when they enter MEIOSIS. The primary oocytes begin meiosis but are arrested at the diplotene state until OVULATION at PUBERTY to give rise to haploid secondary oocytes or ova (OVUM).

Attributes by original data submitter

Sample

source_name
Oocyte
background strain
CD1
antibody
Rabbit IgG, gift of Robert Klose
developmental stage
Oocytes (E18.5)
genotype
Wild-type

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
141733814
Reads aligned (%)
84.1
Duplicates removed (%)
91.0
Number of peaks
811 (qval < 1E-05)

mm9

Number of total reads
141733814
Reads aligned (%)
84.0
Duplicates removed (%)
91.0
Number of peaks
804 (qval < 1E-05)

Base call quality data from DBCLS SRA