Antigen

Antigen Class

No description

Antigen

NA

Cell type

Cell type Class

Others

Cell type

Spleen

MeSH Description

An encapsulated lymphatic organ through which venous blood filters.

Sample

MOLECULE

genomic DNA

DISEASE

None

BIOMATERIAL_PROVIDER

Shin Lin, Stanford University

BIOMATERIAL_TYPE

Primary Tissue

TISSUE_TYPE

Spleen

TISSUE_DEPOT

N/A

COLLECTION_METHOD

Autopsy

DONOR_ID

STL003

DONOR_AGE

34

DONOR_HEALTH_STATUS

polysubstance abuse (NO diabetes, hypertension, coronary artery disease, cancer)

DONOR_SEX

male

DONOR_ETHNICITY

Caucasian

sample_term_id

UBERON_0002106

Sequenced DNA Library

library_name

ERROR: cannot retrieve data from NCBI: too many requests

library_strategy

ERROR: cannot retrieve data from NCBI: too many requests

library_source

ERROR: cannot retrieve data from NCBI: too many requests

library_selection

ERROR: cannot retrieve data from NCBI: too many requests

library_construction_protocol

ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model

ERROR: cannot retrieve data from NCBI: too many requests

cycle_sequence

ERROR: cannot retrieve data from NCBI: too many requests

cycle_count

ERROR: cannot retrieve data from NCBI: too many requests

flow_sequence

ERROR: cannot retrieve data from NCBI: too many requests

flow_count

ERROR: cannot retrieve data from NCBI: too many requests

key_sequence

ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads

30128385

Reads aligned (%)

95.0

Duplicates removed (%)

24.9

Number of peaks

2349 (qval < 1E-05)

hg19

Number of total reads

30128385

Reads aligned (%)

93.0

Duplicates removed (%)

28.7

Number of peaks

3458 (qval < 1E-05)