Antigen

Antigen Class

TFs and others

Antigen

PCF11

Cell type

Cell type Class

Uterus

Cell type

HeLa

Primary Tissue

Cervix

Tissue Diagnosis

Adenocarcinoma

Sample

source_name

pcf11 ChIP in U1 AMO sample repeat 2

cell line

HeLa

transfection

U1 AMO

Sequenced DNA Library

library_name

GSM5776349

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

ChIP-seqs were carried out using standard protocol library were prepared using ChIP-seq preparation kit (Vazyme)

Sequencing Platform

instrument_model

Illumina NovaSeq 6000

hg38

Number of total reads

40334815

Reads aligned (%)

38.6

Duplicates removed (%)

9.3

Number of peaks

841 (qval < 1E-05)

hg19

Number of total reads

40334815

Reads aligned (%)

39.2

Duplicates removed (%)

9.3

Number of peaks

567 (qval < 1E-05)