SRX134776
GSM902931: input DNA, 1; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
B cells
NA
NA

Attributes by original data submitter

Sample

source_name
B cell enriched splenocytes
cell type
B cell enriched splenocytes
strain
C57BL/6 / sv129sv
chip antibody
none
genotype/variation
wildtype

Sequenced DNA Library

library_name
GSM902931: input DNA, 1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
26625776
Reads aligned (%)
98.0
Duplicates removed (%)
19.1
Number of peaks
563 (qval < 1E-05)

mm9

Number of total reads
26625776
Reads aligned (%)
97.8
Duplicates removed (%)
19.2
Number of peaks
650 (qval < 1E-05)

Base call quality data from DBCLS SRA