Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
TP53

Cell type

Cell type Class
Others
Cell type
TPC-1
NA
NA

Attributes by original data submitter

Sample

source_name
TPC1
cell line
TPC1
cell type
papillary thyroid carcinoma
chip antibody
p53 (DO1)
treatment
Nutlin+GSK2830371

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
18600263
Reads aligned (%)
96.9
Duplicates removed (%)
17.6
Number of peaks
440 (qval < 1E-05)

hg19

Number of total reads
18600263
Reads aligned (%)
96.2
Duplicates removed (%)
18.2
Number of peaks
544 (qval < 1E-05)

Base call quality data from DBCLS SRA