SRX1335162
GSM1908113: ChIPseq H3K27ac serum to 2i Day3 BR2; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27ac

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
Embryonic stem cells
developmental stage
E14
chip antibody
H3K27ac (Anti-H3K27ac, C15410196-10, Diagenode)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Libraries were prepared according to Illumina's instructions.

Sequencing Platform

instrument_model
NextSeq 500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
38950828
Reads aligned (%)
86.0
Duplicates removed (%)
44.6
Number of peaks
19020 (qval < 1E-05)

mm9

Number of total reads
38950828
Reads aligned (%)
85.8
Duplicates removed (%)
44.6
Number of peaks
18974 (qval < 1E-05)

Base call quality data from DBCLS SRA