Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
BEAF-32

Cell type

Cell type Class
Larvae
Cell type
Imaginal wing disc
NA
NA

Attributes by original data submitter

Sample

source_name
ChIP against BEAF-32 Wing
strain
Orgon R
tissue
L3 Wing imaginal disc-3rd instar
chip antibody
BEAF-32B (Bushey et. al 2009)

Sequenced DNA Library

library_name
GSM900005: BEAF-32_Wingchip2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

dm3

Number of total reads
9218552
Reads aligned (%)
3.4
Duplicates removed (%)
82.7
Number of peaks
899 (qval < 1E-05)

dm6

Number of total reads
9218552
Reads aligned (%)
2.6
Duplicates removed (%)
86.8
Number of peaks
406 (qval < 1E-05)

Base call quality data from DBCLS SRA