Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Blood

Cell type

HL-60

Primary Tissue

Blood

Tissue Diagnosis

Leukemia

Sample

source_name

HL60 cells

cell line

HL60

cell type

myeloblast

disease

acute myeloblastic leukemia

chip antibody

none

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Lysates were clarified from crosslinked and sonicated cells and JMJD1C-DNA or LYL1-DNA complexes were isolated with antibody. Libraries were prepared according to Illumina's instructions

Sequencing Platform

instrument_model

Illumina HiSeq 2000

hg38

Number of total reads

42230923

Reads aligned (%)

96.8

Duplicates removed (%)

7.1

Number of peaks

1050 (qval < 1E-05)

hg19

Number of total reads

42230923

Reads aligned (%)

95.8

Duplicates removed (%)

8.7

Number of peaks

1205 (qval < 1E-05)