SRX129096
GSM894088: P493-6 T0 RNA POL2; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
RNA polymerase II

Cell type

Cell type Class
Blood
Cell type
P493-6
NA
NA

Attributes by original data submitter

Sample

source_name
B-cell lymphoma
chip antibody
RNA Pol II (Rpb1 N-terminus)
cell type
P493-6

Sequenced DNA Library

library_name
GSM894088: P493-6_T0_RNA_POL2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
37335223
Reads aligned (%)
80.4
Duplicates removed (%)
28.4
Number of peaks
2014 (qval < 1E-05)

hg19

Number of total reads
37335223
Reads aligned (%)
79.5
Duplicates removed (%)
29.5
Number of peaks
1624 (qval < 1E-05)

Base call quality data from DBCLS SRA