SRX129086
GSM894078: P493-6 T0 MED1; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
MED1

Cell type

Cell type Class
Blood
Cell type
P493-6
NA
NA

Attributes by original data submitter

Sample

source_name
B-cell lymphoma
chip antibody
Med1/TRAP220
cell type
P493-6

Sequenced DNA Library

library_name
GSM894078: P493-6_T0_MED1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
37763608
Reads aligned (%)
92.5
Duplicates removed (%)
7.4
Number of peaks
5070 (qval < 1E-05)

hg19

Number of total reads
37763608
Reads aligned (%)
91.5
Duplicates removed (%)
8.3
Number of peaks
5044 (qval < 1E-05)

Base call quality data from DBCLS SRA