Antigen

Antigen Class

TFs and others

Antigen

Nr1d2

Cell type

Cell type Class

Liver

Cell type

Liver

MeSH Description

A large lobed glandular organ in the abdomen of vertebrates that is responsible for detoxification, metabolism, synthesis and storage of various substances.

Sample

source_name

Homogenized mouse liver, WT, 5am/ZT22, Rev-erb(beta) ChIP

strain

C57BL/6

genotype/variation

WT

gender

male

age

8-12 weeks

tissue

liver

time

5am/ZT22

chip antibody

Rev-erb(beta)

antibody vendor

Covance

Sequenced DNA Library

library_name

GSM890126: Reverb_beta_5am

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer IIx

mm10

Number of total reads

39085895

Reads aligned (%)

22.3

Duplicates removed (%)

17.7

Number of peaks

428 (qval < 1E-05)

mm9

Number of total reads

39085895

Reads aligned (%)

22.2

Duplicates removed (%)

18.0

Number of peaks

452 (qval < 1E-05)