Antigen

Antigen Class

TFs and others

Antigen

KDM5C

Cell type

Cell type Class

Kidney

Cell type

Caki-1

Primary Tissue

Kidney

Tissue Diagnosis

Adenocarcinoma Clear Cell

Sample

source_name

caki-1 cell line

tissue

kidney; Derived from metastatic site - skin

cell line

caki-1

chip antibody

KDM5C

chip antibody provider

Abcam

chip antibody catalog

ab72152

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

CHIP followed by phenol/chloroform extraction and EtOH precipitation. TruSeq ChIP Sample Prep Kit, Illumina

Sequencing Platform

instrument_model

Illumina HiSeq 2500

hg38

Number of total reads

33509241

Reads aligned (%)

97.2

Duplicates removed (%)

1.6

Number of peaks

1882 (qval < 1E-05)

hg19

Number of total reads

33509241

Reads aligned (%)

96.0

Duplicates removed (%)

1.8

Number of peaks

990 (qval < 1E-05)