SRX122636
GSM881357: E14 d4 H3K27ac ChIP-seq; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27ac

Cell type

Cell type Class
Pluripotent stem cell
Cell type
mESC derived mesodermal cells
NA
NA

Attributes by original data submitter

Sample

source_name
mESC E14 under Activin A differentiation, day 4
cell type
mESC E14 under Activin A differentiation, day 4
ChIP
H3K27ac

Sequenced DNA Library

library_name
GSM881357: E14_d4_H3K27ac_ChIP-seq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
29497912
Reads aligned (%)
98.4
Duplicates removed (%)
6.4
Number of peaks
6238 (qval < 1E-05)

mm9

Number of total reads
29497912
Reads aligned (%)
98.3
Duplicates removed (%)
6.5
Number of peaks
6218 (qval < 1E-05)

Base call quality data from DBCLS SRA