SRX121867
GSM879924: Input control; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Embryonic fibroblast
Cell type
NIH/3T3
Primary Tissue
Embryo
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
NIH-3T3_Input control
cell line
NIH-3T3
cell type
Mouse embryonic fibroblast cell

Sequenced DNA Library

library_name
GSM879924: Input control
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
22524637
Reads aligned (%)
84.4
Duplicates removed (%)
18.4
Number of peaks
437 (qval < 1E-05)

mm9

Number of total reads
22524637
Reads aligned (%)
84.2
Duplicates removed (%)
18.5
Number of peaks
511 (qval < 1E-05)

Base call quality data from DBCLS SRA