Antigen

Antigen Class

TFs and others

Antigen

Nkx3-1

Cell type

Cell type Class

Prostate

Cell type

Prostate

MeSH Description

A gland in males that surrounds the neck of the URINARY BLADDER and the URETHRA. It secretes a substance that liquefies coagulated semen. It is situated in the pelvic cavity behind the lower part of the PUBIC SYMPHYSIS, above the deep layer of the triangular ligament, and rests upon the RECTUM.

Sample

source_name

Nkx3-1_WT_ChIP-Seq

strain

Recombinant inbred B6 x 129

tissue

whole prostate

genotype/variation

Nkx3-1+/+ (WT)

antibody

anti-Nkx3.1 (Santa Cruz Biotechnology, sc-15022)

Sequenced DNA Library

library_name

GSM878195: Nkx3-1_WT1_ChIP-Seq

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer

mm10

Number of total reads

24425179

Reads aligned (%)

79.8

Duplicates removed (%)

30.5

Number of peaks

21140 (qval < 1E-05)

mm9

Number of total reads

24425179

Reads aligned (%)

79.7

Duplicates removed (%)

30.6

Number of peaks

21163 (qval < 1E-05)