Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me3

Cell type

Cell type Class
Embryo
Cell type
2-cell stage
NA
NA

Attributes by original data submitter

Sample

source_name
2-cell embryos
strain
C57BL6/CBA
chip antibody
H3K4me3 (Merck Millipore, catalogue number 04-745)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
24533989
Reads aligned (%)
76.8
Duplicates removed (%)
49.0
Number of peaks
2006 (qval < 1E-05)

mm9

Number of total reads
24533989
Reads aligned (%)
76.8
Duplicates removed (%)
49.1
Number of peaks
2012 (qval < 1E-05)

Base call quality data from DBCLS SRA