SRX120232
GSM876650: WT.Mature B.Input [8096]; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
B cells
NA
NA

Attributes by original data submitter

Sample

source_name
Mature B
genotype/variation
WT
strain
C57BL/6
chip antibody
NA
extraction method
Ex vivo (MACS sort)
tissue
Lymph Node

Sequenced DNA Library

library_name
GSM876650: WT.Mature_B.Input [8096]
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
7250542
Reads aligned (%)
97.3
Duplicates removed (%)
9.9
Number of peaks
378 (qval < 1E-05)

mm9

Number of total reads
7250542
Reads aligned (%)
97.1
Duplicates removed (%)
10.3
Number of peaks
430 (qval < 1E-05)

Base call quality data from DBCLS SRA