Antigen

Antigen Class

Histone

Antigen

H3K4me3

Cell type

Cell type Class

Gonad

Cell type

Testis

MeSH Description

The male gonad containing two functional parts: the SEMINIFEROUS TUBULES for the production and transport of male germ cells (SPERMATOGENESIS) and the interstitial compartment containing LEYDIG CELLS that produce ANDROGENS.

Sample

source_name

Anti-H3K4me3 9R_testis_ChIP-Seq

strain

B11.S-H2t4/(9R)/J

genotype/variation

Hop2-/-

tissue

testis

chip antibody

Anti-H3K4me3 Millipore (#07-473)

chip antibody vendor

Millipore

sequencing technique

ChIP-Seq

Sequenced DNA Library

library_name

GSM869794: Anti-H3K4me3 9R

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer IIx

mm10

Number of total reads

81074640

Reads aligned (%)

68.8

Duplicates removed (%)

31.0

Number of peaks

77010 (qval < 1E-05)

mm9

Number of total reads

81074640

Reads aligned (%)

68.7

Duplicates removed (%)

31.0

Number of peaks

77194 (qval < 1E-05)