Antigen

Antigen Class

TFs and others

Antigen

Dmc1

Cell type

Cell type Class

Gonad

Cell type

Testis

MeSH Description

The male gonad containing two functional parts: the SEMINIFEROUS TUBULES for the production and transport of male germ cells (SPERMATOGENESIS) and the interstitial compartment containing LEYDIG CELLS that produce ANDROGENS.

Sample

source_name

Anti-DMC1 Prdm9-/-_testis_SSDS

strain

B6; 129P2-Prdm9tm1Ymat/J

genotype/variation

wild type

tissue

testis

chip antibody

Anti-DMC1 (C-20)

chip antibody vendor

Santa Cruz

sequencing technique

Single Stranded DNA Sequencing (SSDS)

Sequenced DNA Library

library_name

GSM869790: Anti-DMC1 Prdm9-/-

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina HiSeq 2000

mm10

Number of total reads

230373393

Reads aligned (%)

32.2

Duplicates removed (%)

20.3

Number of peaks

18538 (qval < 1E-05)

mm9

Number of total reads

230373393

Reads aligned (%)

32.1

Duplicates removed (%)

20.3

Number of peaks

18512 (qval < 1E-05)