Antigen

Antigen Class

TFs and others

Antigen

AR

Cell type

Cell type Class

Prostate

Cell type

C4-2

Tissue

Prostate

Cell Type

Epithelial

Disease

Prostate Cancer

Sample

source_name

C4-2B cells cultured in medium with vehicle control

cell line

C4-2B

cell type

human prostate cancer cell line

treated with

vehicle for 24hrs

chip antibody

AR (Santa Cruz; sc-815)

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Lysates were clarified from sonicated nuclei and protein-DNA complexes were isolated with antibody. Libraries were prepared according to Illumina's paired-end DNA sample Prep kit.

Sequencing Platform

instrument_model

Illumina HiSeq 2000

hg38

Number of total reads

45445004

Reads aligned (%)

88.3

Duplicates removed (%)

10.9

Number of peaks

5355 (qval < 1E-05)

hg19

Number of total reads

45445004

Reads aligned (%)

87.5

Duplicates removed (%)

12.5

Number of peaks

5348 (qval < 1E-05)