Antigen

Antigen Class

TFs and others

Antigen

CHD1

Cell type

Cell type Class

Pluripotent stem cell

Cell type

hESC H1

NA

NA

Sample

source_name

H1 hESCs-CHD1 ChIP-seq

cell type

H1 ES cells were grown in TeSR media on Matrigel (Cellular Dynamics)

chip antibody

Bethyl,A301-218A

Sequenced DNA Library

library_name

GSM831025: H1_CHD1_1

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer IIx

hg38

Number of total reads

37420969

Reads aligned (%)

81.4

Duplicates removed (%)

8.7

Number of peaks

3255 (qval < 1E-05)

hg19

Number of total reads

37420969

Reads aligned (%)

80.8

Duplicates removed (%)

9.9

Number of peaks

1859 (qval < 1E-05)