SRX1161612
Tbx5 Nkx2-5 RE-ChIP-exo WT CM Replica 2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Cardiovascular
Cell type
Cardiomyocytes
NA
NA

Attributes by original data submitter

Sample

isolate
062
dev_stage
Differentiating cardiomyocytes
sex
not applicable
tissue
Differentiating cardiomyocytes

Sequenced DNA Library

library_name
Tbx5_Nkx2-5_WT_CM_rep2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
60920006
Reads aligned (%)
93.4
Duplicates removed (%)
98.6
Number of peaks
2255 (qval < 1E-05)

mm9

Number of total reads
60920006
Reads aligned (%)
93.4
Duplicates removed (%)
98.6
Number of peaks
2222 (qval < 1E-05)

Base call quality data from DBCLS SRA