SRX1161600
Tbx5 ChIP-exo Tbx5;Nkx2-5KO CP Replica 2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Cardiovascular
Cell type
Cardiomyocytes
NA
NA

Attributes by original data submitter

Sample

isolate
050
dev_stage
Differentiating cardiomyocyte precursors
sex
not applicable
tissue
Differentiating cardiomyocyte precursors

Sequenced DNA Library

library_name
Tbx5_DKO_CP_rep2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
40180139
Reads aligned (%)
97.2
Duplicates removed (%)
60.4
Number of peaks
584 (qval < 1E-05)

mm9

Number of total reads
40180139
Reads aligned (%)
97.0
Duplicates removed (%)
60.5
Number of peaks
594 (qval < 1E-05)

Base call quality data from DBCLS SRA