SRX1161580
Gata4 ChIP-exo Tbx5KO CM Replica 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Cardiovascular
Cell type
Cardiomyocytes
NA
NA

Attributes by original data submitter

Sample

isolate
030
dev_stage
Differentiating cardiomyocytes
sex
not applicable
tissue
Differentiating cardiomyocytes

Sequenced DNA Library

library_name
Gata4_TKO_CM_rep1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
71520641
Reads aligned (%)
97.1
Duplicates removed (%)
88.1
Number of peaks
4092 (qval < 1E-05)

mm9

Number of total reads
71520641
Reads aligned (%)
97.0
Duplicates removed (%)
88.2
Number of peaks
4105 (qval < 1E-05)

Base call quality data from DBCLS SRA