SRX1158308
GSM1856449: ChIPseq Suz12 2i BR1; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Suz12

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
Embryonic stem cells
developmental stage
E14
chip antibody
Suz12 (Anti-Suz12, ab1207, Abcam)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Libraries were prepared according to Illumina's instructions.

Sequencing Platform

instrument_model
NextSeq 500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
38131183
Reads aligned (%)
97.3
Duplicates removed (%)
12.7
Number of peaks
694 (qval < 1E-05)

mm9

Number of total reads
38131183
Reads aligned (%)
97.1
Duplicates removed (%)
13.5
Number of peaks
679 (qval < 1E-05)

Base call quality data from DBCLS SRA