SRX1158295
GSM1856436: ChIPseq Input 2i; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
Embryonic stem cells
developmental stage
E14
chip antibody
none

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Libraries were prepared according to Illumina's instructions.

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
44716583
Reads aligned (%)
95.9
Duplicates removed (%)
33.3
Number of peaks
492 (qval < 1E-05)

mm9

Number of total reads
44716583
Reads aligned (%)
95.7
Duplicates removed (%)
33.3
Number of peaks
564 (qval < 1E-05)

Base call quality data from DBCLS SRA