Antigen

Antigen Class

Histone

Antigen

H3K27ac

Cell type

Cell type Class

Liver

Cell type

Liver

MeSH Description

A large lobed glandular organ in the abdomen of vertebrates that is responsible for detoxification, metabolism, synthesis and storage of various substances.

Sample

source_name

liver

strain

C57BL/6

chip antibody

H3K27ac, #39133

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

crosslinked material was lyzed and sonicated. Chromatin precipitated with antibody and DNA was purified by ethanol precipitation

Sequencing Platform

instrument_model

Illumina HiSeq 2000

mm10

Number of total reads

30721941

Reads aligned (%)

97.1

Duplicates removed (%)

24.5

Number of peaks

21831 (qval < 1E-05)

mm9

Number of total reads

30721941

Reads aligned (%)

96.8

Duplicates removed (%)

24.5

Number of peaks

21858 (qval < 1E-05)