Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Uterus
Cell type
Uterus
MeSH Description
The hollow thick-walled muscular organ in the female PELVIS. It consists of the fundus (the body) which is the site of EMBRYO IMPLANTATION and FETAL DEVELOPMENT. Beyond the isthmus at the perineal end of fundus, is CERVIX UTERI (the neck) opening into VAGINA. Beyond the isthmi at the upper abdominal end of fundus, are the FALLOPIAN TUBES.

Attributes by original data submitter

Sample

source_name
Mouse uterus
tissue
uterus
age
8 week
strain
C57BL/6
chip antibody
none

Sequenced DNA Library

library_name
GSM857548: input DNA
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

mm10

Number of total reads
36668321
Reads aligned (%)
99.2
Duplicates removed (%)
6.4
Number of peaks
1888 (qval < 1E-05)

mm9

Number of total reads
36668321
Reads aligned (%)
99.1
Duplicates removed (%)
6.5
Number of peaks
912 (qval < 1E-05)

Base call quality data from DBCLS SRA