Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me2

Cell type

Cell type Class
Blood
Cell type
B cells
NA
NA

Attributes by original data submitter

Sample

source_name
H3K4me2 Act B cell
strain background
C57BL/6
genotype/background
Blimp1(GFP/+)
cell preparation
4-day LPS stimulation, FACS sorted
cell type
Act B cell
cell sorting strategy
B220+GFP- FACS sorted
chip antibody
H3K4me2 Art.Nr: 07-030 Lot.Nr: DAM1724042

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
36143936
Reads aligned (%)
98.4
Duplicates removed (%)
10.4
Number of peaks
54630 (qval < 1E-05)

mm9

Number of total reads
36143936
Reads aligned (%)
98.2
Duplicates removed (%)
10.4
Number of peaks
54603 (qval < 1E-05)

Base call quality data from DBCLS SRA