SRX112983
GSM851333: RenLab-Input-thymus

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
Thymus
NA
NA

Attributes by original data submitter

Sample

source_name
Mouse thymus
strain
C57BL/6
antibody
None

Sequenced DNA Library

library_name
GSM851333: RenLab-Input-thymus
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
29664057
Reads aligned (%)
93.0
Duplicates removed (%)
10.8
Number of peaks
878 (qval < 1E-05)

mm9

Number of total reads
29664057
Reads aligned (%)
92.8
Duplicates removed (%)
10.9
Number of peaks
960 (qval < 1E-05)

Base call quality data from DBCLS SRA