Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27ac

Cell type

Cell type Class
Gonad
Cell type
Testis
MeSH Description
The male gonad containing two functional parts: the SEMINIFEROUS TUBULES for the production and transport of male germ cells (SPERMATOGENESIS) and the interstitial compartment containing LEYDIG CELLS that produce ANDROGENS.

Attributes by original data submitter

Sample

source_name
Mouse testis
strain
C57BL/6
antibody
Active motif, 39133

Sequenced DNA Library

library_name
GSM851326: RenLab-H3K27ac-testis
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

mm10

Number of total reads
22443521
Reads aligned (%)
96.3
Duplicates removed (%)
10.9
Number of peaks
21630 (qval < 1E-05)

mm9

Number of total reads
22443521
Reads aligned (%)
96.1
Duplicates removed (%)
11.0
Number of peaks
21737 (qval < 1E-05)

Base call quality data from DBCLS SRA