SRX112938
GSM851288: RenLab-H3K4me3-embryonic-heart

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me3

Cell type

Cell type Class
Embryo
Cell type
Embryonic brains
NA
NA

Attributes by original data submitter

Sample

source_name
Mouse E14.5 heart
strain
C57BL/6
antibody
Millipore, 05-745

Sequenced DNA Library

library_name
GSM851288: RenLab-H3K4me3-embryonic-heart
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
28866517
Reads aligned (%)
94.5
Duplicates removed (%)
34.3
Number of peaks
31463 (qval < 1E-05)

mm9

Number of total reads
28866517
Reads aligned (%)
94.4
Duplicates removed (%)
34.4
Number of peaks
31492 (qval < 1E-05)

Base call quality data from DBCLS SRA