SRX112906
GSM850396: Rex-GFP-serum-GFP negative H3K27me3

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
Embryonic Stem cells
strain
129/Ola
cell type
ES-cells
source
Chromatin IP against H3K27me3
antibody
Antibody H3K27me3 (Millipore 07-449, DAM-1588246)

Sequenced DNA Library

library_name
GSM850396: Rex-GFP-serum-GFP_negative_H3K27me3
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
37751486
Reads aligned (%)
79.1
Duplicates removed (%)
20.7
Number of peaks
551 (qval < 1E-05)

mm9

Number of total reads
37751486
Reads aligned (%)
78.9
Duplicates removed (%)
20.8
Number of peaks
551 (qval < 1E-05)

Base call quality data from DBCLS SRA