Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Gonad

Cell type

Testis

MeSH Description

The male gonad containing two functional parts: the SEMINIFEROUS TUBULES for the production and transport of male germ cells (SPERMATOGENESIS) and the interstitial compartment containing LEYDIG CELLS that produce ANDROGENS.

Sample

source_name

adult testis

age

adult

gender

male

genetic background

9R female x 13R male F1

genotype

Hop2 -/-

chip antibody

IgG

Sequenced DNA Library

library_name

GSM851664: IgG control rep1

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

mm10

Number of total reads

32976319

Reads aligned (%)

81.3

Duplicates removed (%)

9.7

Number of peaks

416 (qval < 1E-05)

mm9

Number of total reads

32976319

Reads aligned (%)

81.2

Duplicates removed (%)

10.2

Number of peaks

425 (qval < 1E-05)