SRX112183
GSM850474: Ring1B ChIPSeq; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
Undifferentiated ES cells
modification
none
cell line
OS25 ES cells
chip antibody
A-20
chromatin
Fixed
beads
Magnetic beads

Sequenced DNA Library

library_name
GSM850474: Ring1B ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
37553748
Reads aligned (%)
92.8
Duplicates removed (%)
23.6
Number of peaks
21081 (qval < 1E-05)

mm9

Number of total reads
37553748
Reads aligned (%)
92.6
Duplicates removed (%)
23.7
Number of peaks
20982 (qval < 1E-05)

Base call quality data from DBCLS SRA