SRX111814
GSM847774: Kc167 Sin3A ChIPSeq 1 and 2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Sin3A

Cell type

Cell type Class
Cell line
Cell type
Kc167
Source
e/se
Developmental Stage
dorsal closure stage

Attributes by original data submitter

Sample

source_name
Kc167
strain
iso1 (y; bw cn sp)
developmental stage
Kc167
antibody name
Sin3A
manufacturer
White Lab
catalog
N/A

Sequenced DNA Library

library_name
GSM847774: Kc167_Sin3A_ChIPSeq_1 and 2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
41582170
Reads aligned (%)
93.2
Duplicates removed (%)
38.3
Number of peaks
0 (qval < 1E-05)

dm3

Number of total reads
41582170
Reads aligned (%)
93.6
Duplicates removed (%)
34.3
Number of peaks
0 (qval < 1E-05)

Base call quality data from DBCLS SRA