SRX111791
GSM847675: E16-24 CNC ChIPSeq 1 and 2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
cnc

Cell type

Cell type Class
Embryo
Cell type
16-24h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
E16-24
strain
iso1 (y; bw cn sp)
developmental stage
E16-24
antibody name
CNC
manufacturer
White Lab
catalog
N/A

Sequenced DNA Library

library_name
GSM847675: E16-24_CNC_ChIPSeq_1 and 2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
35847184
Reads aligned (%)
85.2
Duplicates removed (%)
31.8
Number of peaks
0 (qval < 1E-05)

dm3

Number of total reads
35847184
Reads aligned (%)
85.3
Duplicates removed (%)
30.8
Number of peaks
0 (qval < 1E-05)

Base call quality data from DBCLS SRA