Antigen

Antigen Class

TFs and others

Antigen

Hnf1b

Cell type

Cell type Class

Kidney

Cell type

mIMCD-3

NA

NA

Sample

source_name

IMCD3_Hnf1b_ChIP-seq

cell line

IMCD3

cell line sournce

mouse kidney

cell type

mouse Inner medullary collceting duct cells

passages

15-20

chip antibody

HNF-1ß

chip antibody vendor

Santa Cruz

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Cells were sonicated and lysate cleared and Immunoprecipitated with the indicated anitbody ChIP-seq libraries were prepared for sequencing using Illumina ChIP-Seq DNA Sample Prep Kit (IP-102-1001)

Sequencing Platform

instrument_model

Illumina HiSeq 2000

mm10

Number of total reads

22346343

Reads aligned (%)

74.6

Duplicates removed (%)

21.0

Number of peaks

16342 (qval < 1E-05)

mm9

Number of total reads

22346343

Reads aligned (%)

74.5

Duplicates removed (%)

21.2

Number of peaks

16299 (qval < 1E-05)