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For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For dm6
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For dm3
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: Input control
wikigenes
PDBj
CellType: Whole body
ATCC
MeSH
RIKEN BRC
SRX1115696
GSM1829892: atf3 INPUT; Drosophila melanogaster; ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
Input control
Antigen
Input control
Cell type
Cell type Class
Adult
Cell type
Whole body
NA
NA
Attributes by original data submitter
Sample
source_name
Adult male fly
tissue
Whole Body
Sex
male
developmental stage
adult
genetic background
atf3 mutant
transfection
Atf3::GFP fusion protein
chip antibody
--
Sequenced DNA Library
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Lysates were clarified from sonicated nuclei and Atf3-DNA complexes were isolated with agarose beads coupled to anti-GFP antibody Libraries were prepared according to Illumina's instructions
Sequencing Platform
instrument_model
Illumina HiSeq 2000
Where can I get the processing logs?
Read processing pipeline
log
dm6
Number of total reads
27652944
Reads aligned (%)
94.2
Duplicates removed (%)
11.9
Number of peaks
1942 (qval < 1E-05)
dm3
Number of total reads
27652944
Reads aligned (%)
94.8
Duplicates removed (%)
9.9
Number of peaks
0 (qval < 1E-05)
Base call quality data from
DBCLS SRA